4wul_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 26BP DNA
reference	Davlieva et al. 'Nucleic 43 4758 2015
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	4wuh_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4wul_A interface=34,35,37,38,39,41,42, lhedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla > 4wul_B interface=33,34,36,37,38,40,41, hedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla
interface signature	KTKTHSN/KTKTHSN

Estimated binding specificities ?

readout + contact

# IC=9.475 IC/col=0.592 n_of_columns=16

specificity:

A |   0   0  83   4  24  83   4  24  24  24  24  24  84   4   4  96
C |   0  96   5   5  24   4  12  24  24  24  24  24   4  70   5   0
G |   0   0   4   4  24   4  80  24  24  24  24  24   4  10   4   0
T |  96   0   4  83  24   5   0  24  24  24  24  24   4  12  83   0

scan!

home
updated Fri Dec 15 21:02:51 2023