4wu4_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 22BP DNA
reference	Davlieva et al. 'Nucleic 43 4758 2015
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	4wuh_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4wu4_A interface=36,39,43, mvlhedltnreheilmliaqgksnqeiadelfitlKtvKthvSnilakldvdnrtqaaiyafqhglak > 4wu4_B interface=34,36,37,39,40,41,44, mvlhedltnreheilmliaqgksnqeiadelfiTlKTvKTHvsNilakldvdnrtqaaiyafqhglak
interface signature	KKS/TKTKTHN

Estimated binding specificities ?

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# IC=7.953 IC/col=0.568 n_of_columns=14

specificity:

A |   0   0   0   4  24   0  24  24  24  56   4  24  13   0
C |   0  92   0  30  24  96  24  24  24   8  13  24  53  96
G |   0   0  96   4  24   0  24  24  24  17  71  24  13   0
T |  96   4   0  58  24   0  24  24  24  15   8  24  17   0

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updated Fri Dec 15 20:55:15 2023