4rkg_AB : 3D-footprint complex

structure name	STRUCTURE OF THE MSL2 CXC DOMAIN BOUND WITH A NON-SPECIFIC (GC)6 DNA
reference	Zheng et al. 'Genes 28 2652 2014
source	Drosophila melanogaster
experiment	X-ray (resolution=2.50, R-factor=?)
reference complex	4rkh_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4rkg_A interface=4,14, pkcRcgittcrnsRcpcyksynscagchcvgcknphk > 4rkg_B interface=5,22, kpkcRcgisgssntlttcrnsRcpcyksynscagchcvgcknphke
interface signature	RR/RR

Estimated binding specificities ?

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# IC=7.355 IC/col=0.817 n_of_columns=9

specificity:

A |   5   0   6  24   6   0   0  10   5
C |  10  96   5  24   5  96   0  60   5
G |  76   0  80  24  85   0  96  10  80
T |   5   0   5  24   0   0   0  16   6

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updated Fri Dec 15 20:41:33 2023