4rb2_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MAGNETOSPIRILLUM GRYPHISWALDENSE MSR-1 SEMET-FUR- MN2+-FEOAB1 OPERATOR
reference	Deng et al. 'Nat 6 7642 ?
source	Magnetospirillum gryphiswaldense
experiment	X-ray (resolution=2.82, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4rb3_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4rb2_C interface=53,54,56,57, mvsrieqrcidkgmkmtdqrrviaqvlsdsadhpdveevyrratakdprisiATvYRtvrlfeeesilerhdfgdraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvplt > 4rb2_D interface=15,51,53,56,57, mvsrieqrcidkgmKmtdqrrviaqvlsdsadhpdveevyrratakdpriSiAtvYRtvrlfeeesilerhdfgdgraryeeapsehhdhlidvnsarvieftspeiealqreiarkhgfrlvghrlelygvpl
interface signature	ATYR/KSAYR

Estimated binding specificities ?

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# IC=11.112 IC/col=0.617 n_of_columns=18

specificity:

A |   0   0  96  24  80  24  24  24   5   5   6   0   0  80  24  24  24  80
C |   0  96   0  24   5  24  24  24   5   5   5   0  96   5  24  24  24   6
G |  96   0   0  24   6  24  24  24   6   5   5  96   0   6  24  24  24   5
T |   0   0   0  24   5  24  24  24  80  81  80   0   0   5  24  24  24   5

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updated Fri Dec 15 20:39:42 2023