| structure name | STRUCTURAL BASIS FOR THYMINE GLYCOSYLASE ACTIVITY ON T:O6-METHYLG MISMATCH BY METHYL-CPG BINDING DOMAIN PROTEIN 4: IMPLICATIONS FOR ROLES OF ARG468 IN MISMATCH RECOGNITION AND CATALYSIS (Methyl-CpG-binding domain protein 4) |
| reference | Ouzon-Shubeita et al. 'To ? ? ? |
| source | Homo sapiens |
| experiment | X-ray (resolution=1.55, R-factor=0.137) |
| structural superfamily | DNA-glycosylase; |
| redundant complexes | 4dk9_A 4e9f_A 4e9g_A 4e9h_A 4ea4_A 4ea5_A 4evv_A 4ew0_A 4ew4_A 4ofe_A 4ofh_A 5chz_A 6vjw_A 7kz0_A 7kz1_A 7kzg_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix formatNGRGTG----LG----LCRG------------ +--------7kz0_A +-------------7 --QG--QG--YC-------------------- L ! ! +---7ef9_A ! +----5 --QG--RG--YC-------------------- ! +---6u7t_A +-10 QGKGLGSGAG--SC--LTKC------------ ! ! +-4b21_A ! ! +-3 --NG--RG------FGRC-------------- ! ! +------4 +-4ejy_A ! ! ! ! --NCNANARC----YGRC-------------- +-11 +------------8 +--2xhi_A ! ! ! ----------YG-------------------- ! ! +---------5kn8_A ! ! NGRGTG----LG----LC-------------- ! ! +------6vjw_A ! +------------------6 --QTLAHGAT--------KT------------ +-12 +------3s6i_A ! ! --RT------------------NCSTNARG-- L ! ! +1mnm_C ! ! +-1 ----------------------ITQCNAACRG L ! ! +-------------------2 +6a8r_A -13 ! ! ! ----------------------NT--NAIARG L ! +------9 +-1b72_B ! ! --------------------RTVAITNAMCRG L ! +---------------------1yrn_A ! ----------------------VAQTNA---- L +-----------------------------1fjl_B |
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updated Tue Dec 19 09:11:16 2023