4mte_ABCD : 3D-footprint complex

structure name	ZINC UPTAKE REGULATOR COMPLEXED WITH ZINC AND DNA
reference	'Plos 12 e1001987 2014
source	Escherichia coli
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4mtd_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4mte_A interface=42,56,57,58,61,62, tttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac > 4mte_B interface=43,57,58,59,62,63, ktttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac > 4mte_C interface=41,55,56,57,60,61, ttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac > 4mte_D interface=44,58,59,60,63,64, ektttqellaqaekicaqrnvrltpqrlevlrlmslqdgaisaYdlldllreaepqaKPPtvYRaldflleqgfvhkvestnsyvlchlfdqpthtsamficdrcgavkeecaegvedimhtlaakmgfalrhnvieahglcaacveveac
interface signature	YKPPYR/YKPPYR/YKPPYR/YKPPYR

Estimated binding specificities ?

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# IC=19.651 IC/col=0.983 n_of_columns=20

specificity:

A |   0   0   0   7  76   0  72  10   0  96   0  96  24   0  96   7  24   7   0  87
C |   0   0   0   7   3   0   0   7   0   0   0   0  24  96   0   7  24   6  96   3
G |   0  96   0  71   7   0  23   3   0   0   0   0  24   0   0   3  24   3   0   3
T |  96   0  96  11  10  96   1  76  96   0  96   0  24   0   0  79  24  80   0   3

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updated Fri Dec 15 20:07:33 2023