interface graph thumbnail
legend  pdf

structure nameMOBM RELAXASE DOMAIN (MOBV; MOB_PRE) BOUND TO PLASMID PMV158 ORIT DNA (22NT+3'THIOPHOSPHATE). MN-BOUND CRYSTAL STRUCTURE AT PH 6.8
(Plasmid recombination enzyme)
referenceBoer et al. 'Proc. 114 E6526 2017
sourceStreptococcus agalactiae
experimentX-ray (resolution=2.20, R-factor=0.189)
sequence familyPlasmid recombination enzyme;
reference complex4lvi_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRRK

Estimated binding specificities ?

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# IC=4.913 IC/col=0.819 n_of_columns=6 specificity:   
A |  75   0   0   6   9  78
C |   9  96   1   9   6   6
G |   6   0   6   6   6   6
T |   6   0  89  75  75   6
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updated Mon Dec 18 10:53:23 2023