4hri_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HETR IN COMPLEX WITH A 21-BP PALINDROMIC DNA AT THE UPSTREAM OF THE HETP PROMOTER FROM ANABAENA
reference	Jiang et al. 'To ? ? ?
source	NOSTOC
experiment	X-ray (resolution=2.95, R-factor=?)
structural superfamily	Periplasmic binding protein-like II;
reference complex	4yrv_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4hri_A interface=59,68,70, didlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpfyertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvpmilqmvfgrke > 4hri_B interface=60,69,71, ndidlikrlgpsamdqimlylafsamrtsghrhgafldaaataakcaiymtyleqgqnlRmtghlhhlEpKrvkiiveevrqalmegkllktlgsqepryliqfpyvwmeqypwippgtsltseekrqiehklpsnlpdaqlvtsfeflelieflhkrsqedlppehrmelsealaehikrrllysgtvtridspwgmpfyaltrpertyimvedtaryfrmmkdwaekrpnamraleeldvpperwdeamqeldeiirtwadkyhqvipmilqmvfgrk
interface signature	REK/REK

Estimated binding specificities ?

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# IC=12.319 IC/col=0.648 n_of_columns=19

specificity:

A |   0   0  24   6   0   0  24  24  24  24  24  24   5   0   0  15  15   0  96
C |  96   0  24   5   0   0  24  24  24  24  24  24  65  96  96  50  15  96   0
G |   0  96  24  80  96  96  24  24  24  24  24  24  10   0   0  16   6   0   0
T |   0   0  24   5   0   0  24  24  24  24  24  24  16   0   0  15  60   0   0

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updated Fri Dec 15 19:20:19 2023