4hje_ABCD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF P53 CORE DOMAIN IN COMPLEX WITH DNA
reference	Chen et al. 'Nucleic 41 8368 2013
source	Homo sapiens
experiment	X-ray (resolution=1.91, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4hje_A interface=29,30,185,186,189, plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnrrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk > 4hje_B interface=29,30,157,185,186,189, plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk > 4hje_C interface=29,157,185,186,189, plsssvpsqktyqgsygfrlgflhsgtaKsvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk > 4hje_D interface=29,30,157,185,186,189, plsssvpsqktyqgsygfrlgflhsgtaKSvtctyspalnkmfcqlaktcpvqlwvdstpppgtrvramaiykqsqhmtevvrrcphhercsdsdglappqhlirvegnlrveylddrntfrhsvvvpyeppevgsdcttihynymcnsscmggmnRrpiltiitledssgnllgrnsfevrvcACpgRdrrteeenlrk
interface signature	KSACR/KSRACR/KRACR/KSRACR

Estimated binding specificities ?

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# IC=18.384 IC/col=0.919 n_of_columns=20

specificity:

A |   1  88   0  96  90   0  11  13  24  16  24   1  24   0  92  90   0   0   0   0
C |  93   3  96   0   4   0  15   5  24   1  24   1  24  96   3   1   0  96  96  14
G |   1   4   0   0   1  96   9  11  24  78  24   4  24   0   0   1  96   0   0   0
T |   1   1   0   0   1   0  61  67  24   1  24  90  24   0   1   4   0   0   0  82

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updated Fri Dec 15 19:19:29 2023