4fzx_D : 3D-footprint complex

structure name	EXONUCLEASE X IN COMPLEX WITH 3' OVERHANGING DUPLEX DNA (Exodeoxyribonuclease 10)
reference	Cheng et al. 'Nucleic 41 7556 2013
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=0.184)
structural superfamily	Ribonuclease H-like;
sequence family	Exonuclease;
multimeric complexes	4fzx_CD 4fzy_AB 4fzz_AB
redundant complexes	4fzy_B 4fzz_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4fzx_D interface=81,100,104,112, mlriidtetcglqggiveiasvdvidgkivnpmshlvrpdrpispqamaihriteamvadkpwiedviphyygsewyvahNasfdrrvlpempgewictMklaRrlwpgikYsnmalyktrklnvqtppglhhhralydcyitaallidimntsgwtaeqmaditg

No structural evidence for specific binding to DNA (<4 informative columns)

Dendrogram of similar interfaces ?

matrix format

  
  LC------ATITNCFCRC--RC--YA------                             +-----4fzx_D    
                                                +--------------1 
  ------ET--VT----------RA--SA----              !              +-----5m1s_D    
                                              +-3 
  ----ST--ATIT------ACKC------HTWC   L        ! !     +--------------5ywt_A    
                                         +----4 +-----2 
  --QT----------------------------       !    !       +--------------8d0k_F    
                                       --5    ! 
  --QT----------------------------       !    +---------------------8d0b_F    
                                         ! 
  ------------------DA------------       +--------------------------3qex_A

home
updated Tue Dec 19 08:48:45 2023