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structure nameCRYSTAL STRUCTURE OF THE SV40 LARGE T-ANTIGEN ORIGIN BINING DOMAIN BOUND TO SITE I DNA
(Large T antigen)
referenceBullock et al. J.Virol. 87 2923 2013
sourceSimian virus 40
experimentX-ray (resolution=3.20, R-factor=0.191)
structural superfamilyOrigin of replication-binding domain, RBD-like;
sequence familyOrigin of replication binding protein;
multimeric complexes2itl_AB 2ntc_AB 4fgn_AB 5d9i_AB
reference complex2itl_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSNRTRR

Estimated binding specificities ?

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# IC=6.691 IC/col=0.956 n_of_columns=7 specificity:   
A |   0   0   0   0   9   0   9
C |   9   0  96  78  11  96  69
G |  87  96   0   9   9   0   9
T |   0   0   0   9  67   0   9
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updated Mon Dec 18 10:16:03 2023