interface graph thumbnail
legend  pdf

structure namePFV INTEGRASE TARGET CAPTURE COMPLEX, APO FORM (TCC-APO), AT 3.15 A RESOLUTION
(Pro-Pol polyprotein)
referenceMaertens et al.
sourceHuman spumaretrovirus
experimentX-ray (resolution=3.15, R-factor=0.224)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

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# IC=2.881 IC/col=0.720 n_of_columns=4 specificity:   
A |  16   4  74   0
C |  16   4   7  96
G |  19  84   8   0
T |  45   4   7   0
scan!

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updated Mon Dec 18 10:07:52 2023