interface graph thumbnail
legend  pdf

structure namePFV INTASOME FREEZE-TRAPPED PRIOR TO 3'-PROCESSING, MN-BOUND FORM (UI- MN)
(PRO-POL POLYPROTEIN)
referenceCherepanov et al. 'Embo 31 3020 2012
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.53, R-factor=0.184)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

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# IC=2.308 IC/col=0.577 n_of_columns=4 specificity:   
A |  16   9  74   1
C |  19   9   7  92
G |  16  69   8   2
T |  45   9   7   1
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updated Mon Dec 18 10:07:41 2023