interface graph thumbnail
legend  pdf

structure namePFV INTASOME PRIOR TO 3'-PROCESSING, APO FORM (UI-APO)
(Pro-Pol polyprotein)
referenceCherepanov et al. 'Embo 31 3020 2012
sourceHuman spumaretrovirus
experimentX-ray (resolution=2.57, R-factor=0.188)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

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# IC=2.279 IC/col=0.570 n_of_columns=4 specificity:   
A |   4   6  10  45
C |   2   6  70  16
G |  88   6   8  16
T |   2  78   8  19
scan!

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updated Mon Dec 18 10:07:31 2023