4d6n_F : 3D-footprint complex

structure name	THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 DAYS INCUBATION IN 5MM MG (STATE 7) (HOMING ENDONUCLEASE I-DMOI)
reference	Marcaida et al. Nat.Struct.Mol.Biol. 22 65 2015
source	DESULFUROCOCCUS MOBILIS
experiment	X-ray (resolution=2.35, R-factor=0.184)
structural superfamily	Homing endonucleases;
reference complex	2vs7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4d6n_F interface=21,23,25,29,30,31,33,35,37,66,68,71,72,73,75,77,79,120,122,124,150,151,153,154,156,163, envsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshlnplppeaaalehh
interface signature	YLYRSERVTQVDTRERSRRWDDRHVL

Estimated binding specificities ?

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# IC=21.140 IC/col=1.174 n_of_columns=18

specificity:

A |   0   0   0   0   0   0   0   8  34  96   0   0   0   0   0   0   0   0
C |   0   0  96  96   0   0   0  17  37   0   0  18   0  96  96   0   0  96
G |   0  96   0   0  96  96  96  43  17   0  96   0   0   0   0  96  96   0
T |  96   0   0   0   0   0   0  28   8   0   0  78  96   0   0   0   0   0

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updated Mon Dec 18 09:56:34 2023