interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A PARTIALLY CLOSED COMPLEX WITH THE ARTIFICIAL BASE PAIR D5SICS-DNAMTP
(DNA POLYMERASE I, THERMOSTABLE)
referenceRomesberg et al. J.Am.Chem.Soc. 135 18637 2013
sourceTHERMUS AQUATICUS
experimentX-ray (resolution=2.17, R-factor=0.183)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNEYNQH

Estimated binding specificities ?

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# IC=2.667 IC/col=0.667 n_of_columns=4 specificity:   
A |   8   0   8   8
C |  11  96   8  63
G |  69   0  69  17
T |   8   0  11   8
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updated Mon Dec 18 09:52:34 2023