interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A RESTRICTION ENZYME PABI IN COMPLEX WITH DNA
referenceMiyazono et al. 'Nat 5 3178 2014
sourcePyrococcus abyssi
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyTransglycosidases;
reference complex5iff_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTKRKEQKAQRAVQMY/TKRKEQKAQRAVQMYR

Estimated binding specificities ?

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# IC=5.330 IC/col=0.888 n_of_columns=6 specificity:   
A |   0   0  24  24   0  96
C |   0   0  24  24  96   0
G |   0  96  24  24   0   0
T |  96   0  24  24   0   0
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updated Fri Dec 15 17:51:18 2023