3vw4_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF COLE2-P9 REP IN COMPLEX WITH THE REPLICATION ORIGIN (REP)
reference	Shirakihara et al. J.Biol.Chem. 290 3601 2015
source	ESCHERICHIA COLI
experiment	X-ray (resolution=2.70, R-factor=0.222)
sequence family	Primase C terminal 1 PriCT1;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3vw4_A interface=16,20,26,71,76,79,80,83,91,93,101,112,113,114,117,118, hhhhhrnyhlfekvrKwayRairqgWpvfsqwldaviqrvemynaslpvplspaecraigksiakythrkFspegFsaVQaaRgrkggtkSkRaavptsaRslkpwealgiSRAtyYRklkc
interface signature	KRWFFVQRSRRSRAYR

Estimated binding specificities ?

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# IC=11.983 IC/col=0.799 n_of_columns=15

specificity:

A |   0  96  24  96   0   0  96  24  24  17   0   8  24   0   0
C |   0   0  24   0  96  96   0  24  24   8  69  17  24  96  96
G |  96   0  24   0   0   0   0  24  24  10  19  63  24   0   0
T |   0   0  24   0   0   0   0  24  24  61   8   8  24   0   0

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updated Tue Dec 19 08:22:39 2023