3vd2_BC : 3D-footprint complex

structure name	STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION
reference	Ethayathulla et al. Proc.Natl.Acad.Sci.USA 109 6066 2012
source	Homo sapiens
experiment	X-ray (resolution=4.00, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	5kbd_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3vd2_B interface=27,28,185,186,189, hefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyre > 3vd2_C interface=29,30,187,188,191, hhhefipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnrrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq
interface signature	KSACR/KSACR

Estimated binding specificities ?

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# IC=8.796 IC/col=0.628 n_of_columns=14

specificity:

A |   5   0   5  24   0  24  24  24  24   5   5  86   0  96
C |   5   0  13  24  96  24  24  24  24   5   5   0  96   0
G |  13  96  11  24   0  24  24  24  24  81  79   5   0   0
T |  73   0  67  24   0  24  24  24  24   5   7   5   0   0

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updated Fri Dec 15 17:28:20 2023