3vd0_BD : 3D-footprint complex

structure name	STRUCTURE OF P73 DNA BINDING DOMAIN TETRAMER MODULATES P73 TRANSACTIVATION
reference	Ethayathulla et al. Proc.Natl.Acad.Sci.USA 109 6066 2012
source	Homo sapiens
experiment	X-ray (resolution=2.95, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	5kbd_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3vd0_B interface=27,157,185,186,189, hefipsntdypgphhfevtfqqsstaKsatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq > 3vd0_D interface=26,27,156,184,185,188, efipsntdypgphhfevtfqqsstaKSatwtyspllkklycqiaktcpiqikvstppppgtairampvykkaehvtdvvkrcpnhelgrdfnegqsapashlirvegnnlsqyvddpvtgrqsvvvpyeppqvgtefttilynfmcnsscvggmnRrpiliiitlemrdgqvlgrrsfegricACpgRdrkadedhyreq
interface signature	KRACR/KSRACR

Estimated binding specificities ?

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# IC=9.376 IC/col=1.042 n_of_columns=9

specificity:

A |   9   0   0   0   9  67   0   0   0
C |   9   0  96  96   9   9   0   0  96
G |   9  96   0   0   9  11  96  96   0
T |  69   0   0   0  69   9   0   0   0

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updated Fri Dec 15 17:27:27 2023