interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PFV S217Q MUTANT INTASOME IN COMPLEX WITH MANGANESE
(PFV integrase)
referenceCherepanov et al. Proc.Natl.Acad.Sci.USA 107 20057 2010
sourceHuman spumaretrovirus
experimentX-ray (resolution=2.72, R-factor=0.212)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

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# IC=2.046 IC/col=0.512 n_of_columns=4 specificity:   
A |   4   9   9  45
C |   2   9  69  16
G |  88   9   9  19
T |   2  69   9  16
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updated Mon Dec 18 08:42:48 2023