interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI L-870,810
(PFV INTEGRASE)
referenceCherepanov et al. Proc.Natl.Acad.Sci.USA 107 20057 2010
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.51, R-factor=0.206)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

contactlogo
# IC=2.363 IC/col=0.591 n_of_columns=4 specificity:   
A |   2   6   8  49
C |   2   6  72  15
G |  88   6   8  17
T |   4  78   8  15
scan!

home
updated Mon Dec 18 08:42:18 2023