interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND RALTEGRAVIR AT 2.65 RESOLUTION
(PFV INTEGRASE)
referenceCherepanov et al.
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.65, R-factor=0.206)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

contactlogo
# IC=2.492 IC/col=0.623 n_of_columns=4 specificity:   
A |   0   8   9  48
C |   0   7  67  16
G |  96   7   9  16
T |   0  74  11  16
scan!

home
updated Mon Dec 18 08:41:27 2023