interface graph thumbnail
legend  pdf

structure namePFV TARGET CAPTURE COMPLEX (TCC) AT 2.97 A RESOLUTION
(INTEGRASE)
referenceMaertens et al. Nature 468 326 2010
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.97, R-factor=0.233)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

readout + contactlogo
# IC=1.853 IC/col=0.463 n_of_columns=4 specificity:   
A |  16   8  67   4
C |  16   8   9  81
G |  19  72   9   4
T |  45   8  11   7
scan!

home
updated Mon Dec 18 08:40:36 2023