interface graph thumbnail
legend  pdf

structure namePFV STRAND TRANSFER COMPLEX (STC) AT 2.81 A RESOLUTION
(INTEGRASE)
referenceMaertens et al. Nature 468 326 2010
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.81, R-factor=0.210)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

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# IC=1.756 IC/col=0.439 n_of_columns=4 specificity:   
A |   8   6  10  42
C |   8   6  70  18
G |  70   6   8  18
T |  10  78   8  18
scan!

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updated Mon Dec 18 08:40:26 2023