3nic_BD : 3D-footprint complex

structure name	DNA BINDING AND CLEAVAGE BY THE GIY-YIG ENDONUCLEASE R.ECO29KI INACTIVE VARIANT Y49F
reference	Stoddard et al.
source	ESCHERICHIA COLI
experiment	X-ray (resolution=2.80, R-factor=?)
reference complex	3mx4_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3nic_B interface=161,162,163,168, hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwrqsrisdhetragselsnrirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsks > 3nic_D interface=85,103,161,162,163,168, hnkkfdrsehvyrndsflelikdavrffsgtpvhslppperfqgagvfalyytghyslydeysrinrkaynlpiyvgkavpagwRqsrisdhetragselsnRirehgrniaktsnldlcdfscrfvifeatgsdmistveaalikiykplwntvvdgfgNHTpgagRfaqaksdwdvihpgrewaekctgvhsepyfieerikqyfsk
interface signature	NHTR/RRNHTR

Estimated binding specificities ?

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# IC=10.219 IC/col=0.639 n_of_columns=16

specificity:

A |   6   6  24  24  24  24  24  24  13   0   0   0   0   0   0   9
C |  75  71  24  24  24  24  24  24  68  96  96   0  96   0   0   6
G |   6  13  24  24  24  24  24  24   6   0   0  96   0  96  96  75
T |   9   6  24  24  24  24  24  24   9   0   0   0   0   0   0   6

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updated Fri Dec 15 16:15:01 2023