interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND GS9137 (ELVITEGRAVIR)
(INTEGRASE)
referenceCherepanov et al. Nature 464 232 2010
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=3.15, R-factor=0.194)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

contactlogo
# IC=2.277 IC/col=0.569 n_of_columns=4 specificity:   
A |  16   6  81   6
C |  16   6   4  78
G |  16  78   4   6
T |  48   6   7   6
scan!

home
updated Mon Dec 18 08:21:11 2023