interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE REPLICATING COMPLEX OF A POL ALPHA FAMILY DNA POLYMERASE, TERNARY COMPLEX 2
(DNA polymerase)
referenceKonigsberg et al.
sourceBACTERIOPHAGE RB69
experimentX-ray (resolution=2.40, R-factor=0.196)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family B, exonuclease do;
reference complex3qex_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signaturePYNKKK

Estimated binding specificities ?

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# IC=2.250 IC/col=0.281 n_of_columns=8 specificity:   
A |  73   9  24  24  24  24   7  73
C |   9  73  24  24  24  24   9   9
G |   7   7  24  24  24  24   7   7
T |   7   7  24  24  24  24  73   7
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updated Mon Dec 18 07:44:48 2023