2ypb_AB : 3D-footprint complex

structure name	STRUCTURE OF THE SCL:E47 COMPLEX BOUND TO DNA
reference	Hoosdally et al. 'Cell 4 135 2013
source	HOMO SAPIENS
experiment	X-ray (resolution=2.87, R-factor=?)
structural superfamily	HLH, helix-loop-helix DNA-binding domain;
reference complex	2ypa_A 2ypa_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ypb_A interface=13,15,16,19,20, gphtkvvrriftNsRErwRQqnvngafaelrklipthppdkklskneilrlamkyinflakllndqe > 2ypb_B interface=17,20,23, sleekdlrdrerrmanNarErvRvrdineafrelgrmcqmhlksdkaqtkllilqqavqvilgleqqvrernln
interface signature	NRERQ/NER

Estimated binding specificities ?

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# IC=7.140 IC/col=0.793 n_of_columns=9

specificity:

A |   0  24  57   0  96  24  54   0   0
C |   0  24  13  96   0  24  13   0   0
G |  96  24  13   0   0  24  16   0  96
T |   0  24  13   0   0  24  13  96   0

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updated Fri Dec 15 13:05:10 2023