2wty_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMODIMERIC MAFB IN COMPLEX WITH THE T-MARE BINDING SITE
reference	Consani Textor et al. Structure 22 466 2014
source	MUS MUSCULUS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;
reference complex	2wt7_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2wty_A interface=33,37,40,41,44,45, sddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklansg > 2wty_B interface=35,39,42,43,46,47, mfsddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklansgr
interface signature	RNYACR/RNYACR

Estimated binding specificities ?

readout + contact

# IC=10.250 IC/col=0.788 n_of_columns=13

specificity:

A |   0   0   0   8  24  96  16   0  24  24   0   0  72
C |   8   0  96  16  24   0  16   0  24  24   0  96   8
G |   0  96   0   8  24   0  56   0  24  24  96   0   8
T |  88   0   0  64  24   0   8  96  24  24   0   0   8

scan!

home
updated Fri Dec 15 12:59:33 2023