2vs8_K : 3D-footprint complex

structure name	THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH DNA AND MN (HOMING ENDONUCLEASE I-DMOI)
reference	Marcaida et al. Proc.Natl.Acad.Sci.USA 105 16888 2008
source	DESULFUROCOCCUS MOBILIS
experiment	X-ray (resolution=2.10, R-factor=0.203)
structural superfamily	Homing endonucleases;
reference complex	2vs7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2vs8_K interface=20,22,24,28,29,30,32,34,36,65,67,70,71,72,74,76,78,119,121,123,149,150,152,153,155,162, nvsgisayllgliigdgglYkLkYkgnRSEyRvViTqksenlikqhiaplmqflidelnvkskiQiVkgDTRyElRvSskklyyyfanmlerirlfnmreqiafikglyvaegdktlkRlRiWnknkalleivsrwlnnlgvrntihlDDhRHgVyvlnisLrdrikfvhtilsshl
interface signature	YLYRSERVTQVDTRERSRRWDDRHVL

Estimated binding specificities ?

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# IC=20.862 IC/col=1.159 n_of_columns=18

specificity:

A |   7   0   0   0   0   0   0   7  66  81   0   0   0   0   0   0   0   0
C |   9   0  96  96   0   0   0   9   7   0   0   0   8  96  96   0   0  96
G |   7  96   0   0  96  96  96   7   7  15  96   0   0   0   0  96  96   0
T |  73   0   0   0   0   0   0  73  16   0   0  96  88   0   0   0   0   0

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updated Mon Dec 18 07:17:29 2023