interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE BASIC-HELIX-LOOP-HELIX DOMAINS OF THE HETERODIMER E47/NEUROD1 BOUND TO DNA
referenceGuanga et al. Biochemistry 47 218 2008
sourceMUS MUSCULUS
experimentX-ray (resolution=2.50, R-factor=?)
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
reference complex2ql2_A 2ql2_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNER/NERM

Estimated binding specificities ?

contactlogo
# IC=6.279 IC/col=0.785 n_of_columns=8 specificity:   
A |   6   0  96   0  24  13   0   6
C |  78  96   0  13  24   6   0   9
G |   6   0   0  70  24  13  96  75
T |   6   0   0  13  24  64   0   6
scan!

home
updated Fri Dec 15 12:50:31 2023