interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN ORIGIN BINDING DOMAIN WITH DNA
(large T antigen)
referenceBullock et al. 'Plos 5 e23 2007
sourceSimian virus 40
experimentX-ray (resolution=2.40, R-factor=0.209)
structural superfamilyOrigin of replication-binding domain, RBD-like;
sequence familyOrigin of replication binding protein;
multimeric complexes2itl_AB 2ntc_AB 4fgn_AB 5d9i_AB
reference complex2itl_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSNRTR

Estimated binding specificities ?

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# IC=6.194 IC/col=0.885 n_of_columns=7 specificity:   
A |  76   8  78   6   0   0   6
C |   6   6   6   0   0  96  78
G |   8  76   6  84  96   0   6
T |   6   6   6   6   0   0   6
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updated Mon Dec 18 06:59:51 2023