2kae_A : 3D-footprint complex

structure name	DATA-DRIVEN MODEL OF MED1:DNA COMPLEX (GATA-TYPE TRANSCRIPTION FACTOR)
source	CAENORHABDITIS ELEGANS
experiment	NMR
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
sequence family	GATA zinc finger;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2kae_A interface=13,14,16,27,31,32,34,44,48,51, sfqcsncsvtetIRwRnirskegiqcNacfIYqRkynktrpvtAvnkYqkRklkvq
interface signature	IRRNIYRAYR

Estimated binding specificities ?

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# IC=10.088 IC/col=1.009 n_of_columns=10

specificity:

A |  96  96  73   0   0  82   0  66   0   7
C |   0   0   7   0   1   0   0  14  96  22
G |   0   0   7  96   7   0   0   0   0   7
T |   0   0   9   0  88  14  96  16   0  60

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updated Mon Dec 18 06:56:28 2023