2k1n_ABCD : 3D-footprint complex

structure name	DNA BOUND STRUCTURE OF THE N-TERMINAL DOMAIN OF ABRB
source	BACILLUS SUBTILIS
experiment	NMR
structural superfamily	AbrB/MazE/MraZ-like;
reference complex	2k1n_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2k1n_A interface=11,13,15,17, mkstgivrkvDeLgRvVipielrrtlgiaekdaleiyvddekiilkkykpnmtcq > 2k1n_B interface=11,13,15,24, mkstgivrkvDeLgRvvipielrRtlgiaekdaleiyvddekiilkkykpnmtcq > 2k1n_C interface=13,15,17,23, mkstgivrkvdeLgRvVipielRrtlgiaekdaleiyvddekiilkkykpnmtcq > 2k1n_D interface=11,13,15, mkstgivrkvDeLgRvvipielrrtlgiaekdaleiyvddekiilkkykpnmtcq
interface signature	DLRV/DLRR/LRVR/DLR

Estimated binding specificities ?

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# IC=8.514 IC/col=0.568 n_of_columns=15

specificity:

A |   3   0  96   6  56  36  24  24  24  24  21   3   0  96  63
C |   5   0   0  78  13  20  24  24  24  24  21   3   0   0  13
G |   3  96   0   6  14  20  24  24  24  24  21  87  96   0  10
T |  85   0   0   6  13  20  24  24  24  24  33   3   0   0  10

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updated Fri Dec 15 12:14:16 2023