2is1_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF UVRD-DNA-SO4 COMPLEX
reference	Lee et al. 'Cell(Cambridge,Mass.)' 127 1349 2006
source	Escherichia coli
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	?;P-loop containing nucleoside triphosphate hydrolases;
reference complex	2is6_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2is1_A interface=419,420,617, dvsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsygnpveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigDRtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsynedlmplqaflshaaleagegqadtwqdavqlmtlhsakglefpqvfivgmeegmfpsqmsldeggrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveevrlratvsrp > 2is1_B interface=601, vsylldslndkqreavaaprsnllvlagagsgktrvlvhriawlmsvencspysimavtftnkaaaemrhrigqlmgtsqggmwvgtfhglahrllrahhmdanlpqdfqildsedqlrllkrlikamnldekqwpprqamwyinsqkdeglrphhiqsveqtwqkvyqayqeacdraglvdfaelllrahelwlnkphilqhyrerftnilvdefqdtnniqyawirllagdtgkvmivgdddqsiygwrgaqveniqrflndfpgaetirleqnyrstsnilsaanaliennngrlgkklwtdgadgepislycafneldearfvvnriktwqdnggalaecailyrsnaqsrvleeallqasmpyriyggmrfferqeikdalsylrlivnrnddaafervvntptrgigdrtldvvrqtsrdrqltlwqacrellqekalagraasalqrfmelidalaqetadmplhvqtdrvikdsglrtmyeqekgekgqtrienleelvtatrqfsydedlmplqaflshaaleagegqdavqlmtlhsakglefpqvfivgmeegmfpsqmrleeerrlayvgvtramqkltltyaetrrlYgkevyhrpsrfigelpeecveev
interface signature	DRY/Y

Estimated binding specificities ?

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# IC=3.379 IC/col=0.169 n_of_columns=20

specificity:

A |   0  24  24  24  24  24  24   8  14  21  21  24  24  24  24  24  24  24  24   0
C |  96  24  24  24  24  24  24   8  14  31  21  24  24  24  24  24  24  24  24   0
G |   0  24  24  24  24  24  24  10  52  21  31  24  24  24  24  24  24  24  24  96
T |   0  24  24  24  24  24  24  70  16  23  23  24  24  24  24  24  24  24  24   0

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updated Fri Dec 15 12:04:26 2023