2iif_A : 3D-footprint complex

structure name	SINGLE CHAIN INTEGRATION HOST FACTOR MUTANT PROTEIN (SCIHF2-K45AE) IN COMPLEX WITH DNA (INTEGRATION HOST FACTOR)
reference	Davey et al.
source	ESCHERICHIA COLI
experiment	X-ray (resolution=2.72, R-factor=0.238)
structural superfamily	IHF-like DNA-binding proteins;
sequence family	Bacterial DNAbinding protein;
reference complex	2iie_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2iif_A interface=104,107,108,109,110,117,147,160,163,164,165,166, mastkselierlatqqshipaktvedavkemlehmastlaqggsggltkaemseylfdklglskrdakelvelffeeirralengeqvelsgfgnfdlrdknqRpgRNPKtgedipItarrvvtfrpgqklksrvenagggerieiRgfgsfslhyrapRtgRNPKtgdkvelegkyvphfkpgkelrdraniyggsghhhhhh
interface signature	RRNPKIRRRNPK

Estimated binding specificities ?

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# IC=8.912 IC/col=0.495 n_of_columns=18

specificity:

A |   0   0  24  24  24  24  24   7   0  96  96  24  24  24  24   7   7   9
C |   0   0  24  24  24  24  24   9  96   0   0  24  24  24  24   9   9   7
G |   0   0  24  24  24  24  24   7   0   0   0  24  24  24  24   7   7  73
T |  96  96  24  24  24  24  24  73   0   0   0  24  24  24  24  73  73   7

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updated Mon Dec 18 06:52:33 2023