2han_AB : 3D-footprint complex

structure name	STRUCTURAL BASIS OF HETERODIMERIC ECDYSTEROID RECEPTOR INTERACTION WITH NATURAL RESPONSE ELEMENT HSP27 GENE PROMOTER
reference	Kolodziejczyk et al. 'Nucleic 35 2705 2007
source	DROSOPHILA MELANOGASTER
experiment	X-ray (resolution=1.95, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	2han_A 2han_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2han_A interface=22,25,29,30,78, khlcsicgdrasgkhygvyscEgcKgffKRtvrkdltyacrenrnciidkrqrnrcqycryqkcltcgmkreavqeeR > 2han_B interface=25,28,32,33,57, rvqeelclvcgdrasgyhynaltcEgcKgffRRsvtksavycckfgracemdmymrRkcqecrlkkclavgmrpecvvpenqcamkr
interface signature	EKKRR/EKRRR

Estimated binding specificities ?

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# IC=9.396 IC/col=0.783 n_of_columns=12

specificity:

A |   0   1  15  24  66  24   6   0  91  96   0  11
C |   0   5   6  24  10  24   0   0   0   0  96  65
G |  96  20  75  24  10  24  10  96   5   0   0  10
T |   0  70   0  24  10  24  80   0   0   0   0  10

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updated Fri Dec 15 11:58:58 2023