2gxa_GHIJKL : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PAPILLOMAVIRUS E1 HEXAMERIC HELICASE WITH SSDNA AND MGADP
reference	Joshua-Tor et al. Nature 442 270 2006
source	Bovine papillomavirus type 1
experiment	X-ray (resolution=3.15, R-factor=?)
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
reference complex	2gxa_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2gxa_G interface= tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkhkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl > 2gxa_H interface=160,161,204, gslqtekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhksHFwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl > 2gxa_I interface=200, tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl > 2gxa_J interface=200, tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl > 2gxa_K interface=203, slqtekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl > 2gxa_L interface=200, tekfdfgtmvqwaydhkyaeeskiayeyalaagsdsnaraflatnsqakhvkdcatmvrhylraetqalsmpayikarcklatgegswksiltffnyqnielitfinalklwlkgipkknclafigppntgksmlcnslihflggsvlsfanhkshfwlasladtraalvddathacwryfdtylrnaldgypvsidrkHkaavqikappllvtsnidvqaedrylylhsrvqtfrfeqpctdesgeqpfnitdadwksffvrlwgrldl
interface signature	/HFH/H/H/H/H

Estimated binding specificities ?

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# IC=4.475 IC/col=0.895 n_of_columns=5

specificity:

A |  16   0   0   0  13
C |  13   0   0   0  13
G |  13   0   0   0  13
T |  54  96  96  96  57

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updated Fri Dec 15 11:57:50 2023