2ezv_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TETRAMERIC RESTRICTION ENDONUCLEASE SFII BOUND TO COGNATE DNA.
reference	Aggarwal et al.
experiment	X-ray (resolution=2.40, R-factor=?)
reference complex	2ezv_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ezv_A interface=106,109,113,206,208,211,213,216,218,220, mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEknRdtlQrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler > 2ezv_B interface=106,208,210,213,215,218,220,222, mhqdyrelsldelesvekqtlrtivqalqqyskeaksifettaadssgevivlaeditqyalevaetypinrrfagfidykrvrwlpsphgllpqvllvdakastEknrdtlqrsqlpmdaefrntssgevvtmeagviphlmlqsandgvlpavttsifvhfyyrelkdvegryrelksiyvlslpharlkqrynpdpdtsffgagKhSpaRgEvaRiRvYfdrlkeacpwrlqelhysadseytqprwrdlndaghevtkeflfler
interface signature	ERQKSRERRY/EKSRERRY

Estimated binding specificities ?

readout + contact

# IC=10.669 IC/col=0.821 n_of_columns=13

specificity:

A |   9   0   0   0   0  69  24  24  24  67   0   0   0
C |  11   0   0  96  96   9  24  24  24  11   0   0  96
G |   9  96  96   0   0   9  24  24  24   9  96  96   0
T |  67   0   0   0   0   9  24  24  24   9   0   0   0

scan!

home
updated Fri Dec 15 11:48:34 2023