2efw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE RTP:NRB COMPLEX FROM BACILLUS SUBTILIS
reference	Wilce et al. J.Mol.Biol. 370 481 2007
source	Bacillus subtilis
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1f4k_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2efw_A interface=9,28,46,47,48,51,52,74,76, stgflvkqRaflklymitmteqerlygLkllevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaKlQevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf > 2efw_B interface=9,31,46,47,48,51,52, stgflvkqRaflklymitmteqerlyglklLevlrsefkeigfkpNHTevYRslhellddgilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf
interface signature	RLNHTYRKQ/RLNHTYR

Estimated binding specificities ?

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# IC=14.706 IC/col=0.817 n_of_columns=18

specificity:

A |  11  24  24   0   0  96  69   0  96  24  24  24   0   0   0  96   0  69
C |   9  24  24   0   0   0   9  96   0  24  24  24   0   0   0   0  96   9
G |  67  24  24   0  96   0   9   0   0  24  24  24  96  96   0   0   0   9
T |   9  24  24  96   0   0   9   0   0  24  24  24   0   0  96   0   0   9

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updated Fri Dec 15 11:47:35 2023