2e52_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURAL ANALYSIS OF HINDIII RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNA AT 2.0 ANGSTROM RESOLUTION
reference	Watanabe et al. 'Acta 65 1326 2009
source	HAEMOPHILUS INFLUENZAE
experiment	X-ray (resolution=2.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2e52_C interface=56,60,61,88,116,117,118,120,122,123,125, kksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqRgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl > 2e52_D interface=55,59,60,115,116,117,119,121,122,124, ksalekllslienltnqefkqatnslisfiyklnrnevielvrsigilpeaikpSstqEKlfskagdivlakafqllnlnskpleqrgnagdvialskefnyglvadaksfrlsRTAkNqKDfKvkalsewredkdyavltapffqypttksqifkqsldenvllfswehlaillqldleetnifsfeqlwnfpkkqskktsvsdaennfmrdfnkyfmdlfkidkdtlnqllqkeinfieersliekeywkkqiniiknftreeaieallkdinmsskietidsfikgiksndrlyl
interface signature	SEKRRTANKDK/SEKRTANKDK

Estimated binding specificities ?

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# IC=9.422 IC/col=1.047 n_of_columns=9

specificity:

A |  11  96  96   0   0   0   0  11  19
C |  67   0   0   0  96   0   0   9  10
G |   9   0   0  96   0   0   0  67  67
T |   9   0   0   0   0  96  96   9   0

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updated Fri Dec 15 11:47:21 2023