interface graph thumbnail
legend  pdf

structure nameSTRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX REPRESSOR OMEGA TO MUTATED DIRECT DNA HEPTAD REPEATS
referenceWeihofen et al. 'Nucleic 34 1450 2006
sourceSTREPTOCOCCUS PYOGENES
experimentX-ray (resolution=2.90, R-factor=?)
structural superfamilyRibbon-helix-helix;
reference complex2bnw_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTR/DTR

Estimated binding specificities ?

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# IC=4.774 IC/col=0.955 n_of_columns=5 specificity:   
A |   4   0  60   3  96
C |   4  96  12  87   0
G |   4   0  12   3   0
T |  84   0  12   3   0
scan!

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updated Fri Dec 15 11:39:13 2023