2bnz_ACD : 3D-footprint complex

structure name	STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX OMEGA REPRESSOR TO INVERTED DNA HEPTAD REPEATS
reference	Weihofen et al. 'Nucleic 34 1450 2006
source	STREPTOCOCCUS PYOGENES
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Ribbon-helix-helix;
reference complex	2bnw_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2bnz_A interface=8,10, kdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl > 2bnz_C interface=10,12, akkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl > 2bnz_D interface=5,7, mgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl
interface signature	TR/TR/TR

Estimated binding specificities ?

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# IC=6.080 IC/col=0.608 n_of_columns=10

specificity:

A |   6   6  24  24  24  78   0   6   0  78
C |   6  78  24  24  24   6   0   6   0   6
G |   6   6  24  24  24   6  96   6  96   6
T |  78   6  24  24  24   6   0  78   0   6

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updated Fri Dec 15 11:38:02 2023