2bnw_BCD : 3D-footprint complex

structure name	STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX OMEGA REPRESSOR TO DIRECT DNA HEPTAD REPEATS
reference	Weihofen et al. 'Nucleic 34 1450 2006
source	STREPTOCOCCUS PYOGENES
experiment	X-ray (resolution=2.45, R-factor=?)
structural superfamily	Ribbon-helix-helix;
reference complex	2bnw_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2bnw_B interface=11,13, makkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl > 2bnw_C interface=11,13, makkdimgdkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl > 2bnw_D interface=3,5,7, mgDkTvRvradlhhiikietaknggnvkevmdqaleeyirkylpdkl
interface signature	TR/TR/DTR

Estimated binding specificities ?

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# IC=8.749 IC/col=0.729 n_of_columns=12

specificity:

A |   0   0   0   0  96  14  24  24  24  14   7  73
C |   0   0   0   0   0   7  24  24  24  17   1   7
G |   0  96   0  96   0  16  24  24  24  14  88   7
T |  96   0  96   0   0  59  24  24  24  51   0   9

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updated Fri Dec 15 11:37:55 2023