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interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

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updated Fri Dec 15 11:24:21 2023

structure name	CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE LAMBDA IN COMPLEX WITH A ONE NUCLEOTIDE DNA GAP
reference	Garcia-Diaz et al.
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Nucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;DNA polymerase beta-like, second domain;
reference complex	2bcq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1xsl_E interface=24,25,27, nhnlhiteklevlakaysvqgdkWRaLgyakainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw > 1xsl_I interface=25,26,28,32, tnhnlhiteklevlakaysvqgdkWRaLgyaKainalksfhkpvtsyqeacsipgigkrmaekiieilesghlrkldhisesvpvlelfsniwgagtktaqmwyqqgfrsledirsqaslttqqaiglkhysdflermpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifsrlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacallyftgsahfnrsmralaktkgmslsehalstavvrnthgckvgpgrvlptptekdvfrllglpyrepaerdw