1xbr_AB : 3D-footprint complex

structure name	T DOMAIN FROM XENOPUS LAEVIS BOUND TO DNA
reference	Nature 389 884 1997 Escherichia coli BL21(DE3)
source	XENOPUS LAEVIS
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	p53-like transcription factors;
reference complex	1xbr_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1xbr_A interface=29,156,157,173,177, elkvsleerdlwtrfkeltnemivtkngRrmfpvlkvsmsgldpnamytvlldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkdpvsfskvkltnkmngggqimlnslhkyeprihivrvggtqrmitshsfpetqfiavTAyqneeitalkikhnpFakaFldakern > 1xbr_B interface=29,156,157,173,177, elkvsleerdlwtrfkeltnemivtkngRrmfpvlkvsmsgldpnamytvlldfvaadnhrwkyvngewvpggkpepqapscvyihpdspnfgahwmkdpvsfskvkltnkmngggqimlnslhkyeprihivrvggtqrmitshsfpetqfiavTAyqneeitalkikhnpFakaFldaker
interface signature	RTAFF/RTAFF

Estimated binding specificities ?

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# IC=8.770 IC/col=0.487 n_of_columns=18

specificity:

A |   3  24  24  24   0  79   8  24  24  72  14   7   2   0  24  24  24  90
C |   2  24  24  24  96  12  84  24  24   2   9  11   2   0  24  24  24   2
G |   0  24  24  24   0   4   2  24  24  13  61  64   4  96  24  24  24   2
T |  91  24  24  24   0   1   2  24  24   9  12  14  88   0  24  24  24   2

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updated Fri Dec 15 11:22:18 2023