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legend  pdf

structure nameHYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D SINGLE MUTANT M29F IN COMPLEX WITH DNA GTAATTAC
(DNA-BINDING PROTEINS 7A7B7D)
referenceWang et al. 'NUCLEIC 33 430 2005
sourceSULFOLOBUS ACIDOCALDARIUS
experimentX-ray (resolution=1.70, R-factor=0.181)
structural superfamilyChromo domain-like;
sequence family7kD DNAbinding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYWVFSR

Estimated binding specificities ?

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# IC=2.038 IC/col=0.408 n_of_columns=5 specificity:   
A |  22  65  71   3  11
C |  17   8   8   1   8
G |  14  10   8  24  12
T |  43  13   9  68  65
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updated Mon Dec 18 06:15:22 2023