1t9j_AB : 3D-footprint complex

structure name	I-CREI(Q47E)/DNA COMPLEX
reference	Monnat Jr. et al. Biochemistry 43 14015 2004
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1t9j_A interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 1t9j_B interface=20,22,24,26,28,30,31,36,38,42,44,64,66,68,71,137,138, tkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlSltfQvTektqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQSQTYRRVKT/SIQKNSYQSQTYRRVKT

Estimated binding specificities ?

readout + contact

# IC=23.415 IC/col=1.064 n_of_columns=22

specificity:

A |   0  96  96  72  69   0   0   0   0   8  24  11  61   0  96   0  96   0   2   0   0   0
C |  96   0   0   2   1  96   0   0  96   5  24  11   8   0   0  96   0   0  22   0   0  96
G |   0   0   0  17   0   0  96   0   0  75  24   8  11  96   0   0   0  96   0   0   0   0
T |   0   0   0   5  26   0   0  96   0   8  24  66  16   0   0   0   0   0  72  96  96   0

scan!

home
updated Fri Dec 15 11:05:13 2023