1sax_AB : 3D-footprint complex

structure name	THREE-DIMENSIONAL STRUCTURE OF S.AUREUS METHICILLIN-RESISTANCE REGULATING TRANSCRIPTIONAL REPRESSOR MECI IN COMPLEX WITH 25-BP DS- DNA
reference	Mallorqui-Fernandez et al.
source	Staphylococcus aureus subsp. aureus
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1sax_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1sax_A interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk > 1sax_B interface=41,42,44,45,46,49, nktyeissaewevmniiwmkkyasanniieeiqmqkdwspKTiRTLitRlykkgfidrkkdnkifqyyslveesdikyktsknfinkvykggfnslvlnfvekedlsqdeieelrnilnk
interface signature	KTRTLR/KTRTLR

Estimated binding specificities ?

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# IC=12.086 IC/col=0.806 n_of_columns=15

specificity:

A |  96   9   0  96   0  73  24  24   4   0   0  77  24   0  77
C |   0   9  13   0  96   9  24  24   9   0   0   0  24   0   6
G |   0  10   0   0   0   5  24  24   9  96   0  19  24   0   9
T |   0  68  83   0   0   9  24  24  74   0  96   0  24  96   4

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updated Fri Dec 15 11:01:12 2023